R: Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci

# Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci

## Documentation for package ‘hwde’ version 0.67-3

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

decode.genotypes | Creates contrasts that relate to a single locus
hwde | Fit relevant models, and test for various types of departure from Hardy-Weinberg equilibrium. Allows only 2 alleles per locus. The number of loci is arbitrary.
hwexact | Exact test of HWE
IndianIrish | Observed genotype frequencies at MN and S loci, for 2 populations
make.contrasts | Calculate contrasts required by the function
mendelABC | Mendel's F2 trifactorial data for seed shape (A: round or wrinkled), cotyledon color (B: albumen yellow or green), and seed coat color (C: grey-brown or white)
snphwe | Exact test of HWE