dat
dlg
do_dssp
edi
editconf
edo
edr
ene
eneconv
eps
g87
g96
g_anaeig
g_analyze
g_angle
g_bond
g_bundle
g_chi
g_cluster
g_confrms
g_coord
g_covar
g_density
g_dielectric
g_dih
g_dipoles
g_disre
g_dist
g_dyndom
g_enemat
g_energy
g_filter
g_gyrate
g_h2order
g_hbond
g_helix
g_mdmat
g_mindist
g_morph
g_msd
g_nmeig
g_nmens
g_order
g_potential
g_rama
g_rdf
g_rms
g_rmsdist
g_rmsf
g_rotacf
g_saltbr
g_sas
g_sgangle
g_sorient
g_tcaf
g_traj
g_velacc
genbox
genconf
gendr
genion
genpr
gmxcheck
gmxdump
gro
grompp
hdb
highway
itp
m2p
make_ndx
mdp
mdrun
mk_angndx
mtx
ndx
ngmx
pdb
pdb2gmx
protonate
rtp
tex
top
tpa
tpb
tpbconv
tpr
trj
trjcat
trjconv
trjorder
trr
wheel
x2top
xpm
xpm2ps
xrama
xtc
xvg
map
log
